Here is a picture of my original convertible top now for sale on Craigslist. You can see it has some damage (a crack, maybe two) in that area. I should inspect the replacement top I have today.-The weatherstripping around the trunk latch above the water collecting channel has a couple of small chunks missing. I'm not sure what to do about this, will this be a leak issue?
I bought my Sky with one of those cheap plexiglass rear wind shields that squeeze between the trunk lid and tulip, a horrible design. I took it off before I left the seller's property. That inferior product was rough on the area. In your case, it is possible the donor Sky had one of those dang things installed, causing your missing chunks.